
By now she should be into her routine so, much as Cocker Spaniels are full of energy and not happy being forced to take a nap, I'd think she shouldn't be kicking off like that. And it's not as if you are leaving her alone if you are working from home. Ideally however, the crate should be left, top and 3 sides covered with the door open so she uses the crate to take a nap, just like any other dog bed. Would she object to being crated if the crate is in with you where you work? Alternatively can you attach the pen to the crate so it's there, door open, for her to go into for a nap during the day if the pen isn't big enough to have the crate in there.
Now she should be able to go out for a walk away from your property ( all her injections done?) I suggest you make a time during the day for her to go out, to use up some of the energy she'll have
Just as with kids, it's all about routine, routine, routine so she learns there will be a time for her, and a time that's not for her. A tired dog is always easier to live with!
Oh and when you have to go out, leave a radio, or TV, on playing softly so she doesn't feel quite so 'left'.